Tpetra parallel linear algebra  Version of the Day
Tpetra_Details_copyOffsets.hpp
Go to the documentation of this file.
1 /*
2 // @HEADER
3 // ***********************************************************************
4 //
5 // Tpetra: Templated Linear Algebra Services Package
6 // Copyright (2008) Sandia Corporation
7 //
8 // Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
9 // the U.S. Government retains certain rights in this software.
10 //
11 // Redistribution and use in source and binary forms, with or without
12 // modification, are permitted provided that the following conditions are
13 // met:
14 //
15 // 1. Redistributions of source code must retain the above copyright
16 // notice, this list of conditions and the following disclaimer.
17 //
18 // 2. Redistributions in binary form must reproduce the above copyright
19 // notice, this list of conditions and the following disclaimer in the
20 // documentation and/or other materials provided with the distribution.
21 //
22 // 3. Neither the name of the Corporation nor the names of the
23 // contributors may be used to endorse or promote products derived from
24 // this software without specific prior written permission.
25 //
26 // THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
27 // EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
28 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
29 // PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
30 // CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
31 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
32 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
33 // PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
34 // LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
35 // NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
36 // SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
37 //
38 // ************************************************************************
39 // @HEADER
40 */
41 
42 #ifndef TPETRA_DETAILS_COPYOFFSETS_HPP
43 #define TPETRA_DETAILS_COPYOFFSETS_HPP
44 
49 
50 #include "TpetraCore_config.h"
52 #include "Kokkos_Core.hpp"
53 #include <limits>
54 #include <type_traits>
55 
56 namespace Tpetra {
57 namespace Details {
58 
59 //
60 // Implementation details for copyOffsets (see below).
61 // Users should skip over this anonymous namespace.
62 //
63 namespace { // (anonymous)
64 
65  // Implementation detail of copyOffsets (see below). Determines
66  // whether integer overflow is impossible on assignment from an
67  // InputType to an OutputType.
68  //
69  // Implicit here is the assumption that both input and output types
70  // are integers.
71  template<class OutputType, class InputType>
72  struct OutputCanFitInput {
73  private:
74  static constexpr bool output_signed = std::is_signed<OutputType>::value;
75  static constexpr bool input_signed = std::is_signed<InputType>::value;
76 
77  public:
78  static const bool value = sizeof (OutputType) > sizeof (InputType) ||
79  (sizeof (OutputType) == sizeof (InputType) &&
80  ! output_signed && input_signed);
81  };
82 
83  // Avoid warnings for "unsigned integer < 0" comparisons.
84  template<class InputType,
85  bool input_signed = std::is_signed<InputType>::value>
86  struct Negative {};
87 
88  template<class InputType>
89  struct Negative<InputType, true> {
90  static KOKKOS_INLINE_FUNCTION bool
91  negative (const InputType src) {
92  return src < InputType (0);
93  }
94  };
95 
96  template<class InputType>
97  struct Negative<InputType, false> {
98  static KOKKOS_INLINE_FUNCTION bool
99  negative (const InputType /* src */) {
100  return false;
101  }
102  };
103 
104  template<class InputType>
105  KOKKOS_INLINE_FUNCTION bool negative (const InputType src) {
106  return Negative<InputType>::negative (src);
107  }
108 
109  template<class OutputType, class InputType>
110  struct OverflowChecker {
111  private:
112  static constexpr bool output_signed = std::is_signed<OutputType>::value;
113  static constexpr bool input_signed = std::is_signed<InputType>::value;
114 
115  public:
116  // 1. Signed to unsigned could overflow due to negative numbers.
117  // 2. Larger to smaller could overflow.
118  // 3. Same size but unsigned to signed could overflow.
119  static constexpr bool could_overflow =
120  (! output_signed && input_signed) ||
121  (sizeof (OutputType) < sizeof (InputType)) ||
122  (sizeof (OutputType) == sizeof (InputType) &&
123  output_signed && ! input_signed);
124 
125  KOKKOS_INLINE_FUNCTION bool
126  overflows (const InputType src) const
127  {
128  if (! could_overflow) {
129  return false;
130  }
131  else {
132  // Signed to unsigned could overflow due to negative numbers.
133  if (! output_signed && input_signed) {
134  return negative (src);
135  }
136  // We're only comparing InputType with InputType here, so this
137  // should not emit warnings.
138  return src < minDstVal_ || src > maxDstVal_;
139  }
140  }
141 
142  private:
143  // If InputType is unsigned and OutputType is signed, casting max
144  // OutputType to InputType could overflow. See #5548.
145  InputType minDstVal_ = input_signed ?
146  std::numeric_limits<OutputType>::min () : OutputType (0);
147  InputType maxDstVal_ = std::numeric_limits<OutputType>::max ();
148  };
149 
150 
151  template<class OutputViewType, class InputViewType>
152  void
153  errorIfOverflow (const OutputViewType& dst,
154  const InputViewType& src,
155  const size_t overflowCount)
156  {
157  if (overflowCount == 0) {
158  return;
159  }
160 
161  std::ostringstream os;
162  const bool plural = overflowCount != size_t (1);
163  os << "copyOffsets: " << overflowCount << " value" <<
164  (plural ? "s" : "") << " in src were too big (in the "
165  "sense of integer overflow) to fit in dst.";
166 
167  const bool verbose = Details::Behavior::verbose ();
168  if (verbose) {
169  const size_t maxNumToPrint =
171  const size_t srcLen (src.extent (0));
172  if (srcLen <= maxNumToPrint) {
173  auto dst_h = Kokkos::create_mirror_view (dst);
174  auto src_h = Kokkos::create_mirror_view (src);
175  Kokkos::deep_copy (src_h, src);
176  Kokkos::deep_copy (dst_h, dst);
177 
178  os << " src: [";
179  for (size_t k = 0; k < srcLen; ++k) {
180  os << src_h[k];
181  if (k + size_t (1) < srcLen) {
182  os << ", ";
183  }
184  }
185  os << "], ";
186 
187  os << " dst: [";
188  for (size_t k = 0; k < srcLen; ++k) {
189  os << dst_h[k];
190  if (k + size_t (1) < srcLen) {
191  os << ", ";
192  }
193  }
194  os << "].";
195  }
196  else {
197  os << " src.extent(0) > " << maxNumToPrint << ", Tpetra's "
198  "verbose print count threshold. To increase this, set the "
199  "environment variable TPETRA_VERBOSE_PRINT_COUNT_THRESHOLD "
200  "to the desired threshold and rerun. You do NOT need to "
201  "rebuild Trilinos.";
202  }
203  }
204  TEUCHOS_TEST_FOR_EXCEPTION(true, std::runtime_error, os.str ());
205  }
206 
207  // Implementation detail of copyOffsets (see below).
208  //
209  // Kokkos parallel_reduce functor for copying offset ("ptr") arrays.
210  // Tpetra::Details::FixedHashTable uses this in its "copy"
211  // constructor for converting between different Device types. All
212  // the action happens in the partial specializations for different
213  // values of outputCanFitInput. "Output can fit input" means that
214  // casting the input's value type to the output's value type will
215  // never result in integer overflow.
216  template<class OutputViewType,
217  class InputViewType,
218  const bool outputCanFitInput =
219  OutputCanFitInput<typename OutputViewType::non_const_value_type,
220  typename InputViewType::non_const_value_type>::value>
221  class CopyOffsetsFunctor {};
222 
223  // Specialization for when overflow is possible.
224  template<class OutputViewType, class InputViewType>
225  class CopyOffsetsFunctor<OutputViewType, InputViewType, false> {
226  public:
227  using execution_space = typename OutputViewType::execution_space;
228  using size_type = typename OutputViewType::size_type;
229  using value_type = size_t;
230 
231  using input_value_type = typename InputViewType::non_const_value_type;
232  using output_value_type = typename OutputViewType::non_const_value_type;
233 
234  CopyOffsetsFunctor (const OutputViewType& dst, const InputViewType& src) :
235  dst_ (dst), src_ (src)
236  {
237  static_assert (Kokkos::Impl::SpaceAccessibility<
238  typename OutputViewType::memory_space,
239  typename InputViewType::memory_space>::accessible,
240  "CopyOffsetsFunctor (implements copyOffsets): Output "
241  "View's space must be able to access the input View's "
242  "memory space.");
243  }
244 
245  KOKKOS_INLINE_FUNCTION void
246  operator () (const size_type i, value_type& overflowCount) const {
247  const input_value_type src_i = src_(i);
248  if (checker_.overflows (src_i)) {
249  ++overflowCount;
250  }
251  dst_(i) = static_cast<output_value_type> (src_i);
252  }
253 
254  KOKKOS_INLINE_FUNCTION void
255  operator () (const size_type i) const {
256  const input_value_type src_i = src_(i);
257  dst_(i) = static_cast<output_value_type> (src_i);
258  }
259 
260  KOKKOS_INLINE_FUNCTION void init (value_type& overflowCount) const {
261  overflowCount = 0;
262  }
263 
264  KOKKOS_INLINE_FUNCTION void
265  join (volatile value_type& result,
266  const volatile value_type& current) const {
267  result += current;
268  }
269 
270  private:
271  OutputViewType dst_;
272  InputViewType src_;
273  OverflowChecker<output_value_type, input_value_type> checker_;
274  };
275 
276  // Specialization for when overflow is impossible.
277  template<class OutputViewType, class InputViewType>
278  class CopyOffsetsFunctor<OutputViewType, InputViewType, true> {
279  public:
280  using execution_space = typename OutputViewType::execution_space;
281  using size_type = typename OutputViewType::size_type;
282  using value_type = size_t;
283 
284  CopyOffsetsFunctor (const OutputViewType& dst, const InputViewType& src) :
285  dst_ (dst),
286  src_ (src)
287  {
288  static_assert (Kokkos::Impl::SpaceAccessibility<
289  typename OutputViewType::memory_space,
290  typename InputViewType::memory_space>::accessible,
291  "CopyOffsetsFunctor (implements copyOffsets): Output "
292  "View's space must be able to access the input View's "
293  "memory space.");
294  }
295 
296  KOKKOS_INLINE_FUNCTION void
297  operator () (const size_type i, value_type& /* overflowCount */) const {
298  // Overflow is impossible in this case, so there's no need to check.
299  dst_(i) = src_(i);
300  }
301 
302  KOKKOS_INLINE_FUNCTION void
303  operator () (const size_type i) const {
304  dst_(i) = src_(i);
305  }
306 
307  KOKKOS_INLINE_FUNCTION void init (value_type& overflowCount) const {
308  overflowCount = 0;
309  }
310 
311  KOKKOS_INLINE_FUNCTION void
312  join (volatile value_type& /* result */,
313  const volatile value_type& /* current */) const
314  {}
315 
316  private:
317  OutputViewType dst_;
318  InputViewType src_;
319  };
320 
321  // Implementation detail of copyOffsets (see below).
322  //
323  // We specialize copyOffsets on two different conditions:
324  //
325  // 1. Are the two Views' layouts the same, and do the input and
326  // output Views have the same value type?
327  // 2. Can the output View's execution space access the input View's
328  // memory space?
329  //
330  // If (1) is true, that makes the implementation simple: just call
331  // Kokkos::deep_copy (FixedHashTable always uses the same layout, no
332  // matter the device type). Otherwise, we need a custom copy
333  // functor. If (2) is true, then we can use CopyOffsetsFunctor
334  // directly. Otherwise, we have to copy the input View into the
335  // output View's memory space, before we can use the functor.
336  //
337  template<class OutputViewType,
338  class InputViewType,
339  const bool sameLayoutsSameOffsetTypes =
340  std::is_same<typename OutputViewType::array_layout,
341  typename InputViewType::array_layout>::value &&
342  std::is_same<typename OutputViewType::non_const_value_type,
343  typename InputViewType::non_const_value_type>::value,
344  const bool outputExecSpaceCanAccessInputMemSpace =
345  Kokkos::Impl::SpaceAccessibility<
346  typename OutputViewType::memory_space,
347  typename InputViewType::memory_space>::accessible>
348  struct CopyOffsetsImpl {
349  static void run (const OutputViewType& dst, const InputViewType& src);
350  };
351 
352  // Specialization for sameLayoutsSameOffsetTypes = true:
353  //
354  // If both input and output Views have the same layout, and both
355  // input and output use the same type for offsets, then we don't
356  // need to check for overflow, and we can use Kokkos::deep_copy
357  // directly. It doesn't matter whether the output execution space
358  // can access the input memory space: Kokkos::deep_copy takes care
359  // of the details.
360  template<class OutputViewType,
361  class InputViewType,
362  const bool outputExecSpaceCanAccessInputMemSpace>
363  struct CopyOffsetsImpl<OutputViewType, InputViewType,
364  true, outputExecSpaceCanAccessInputMemSpace> {
365  static void run (const OutputViewType& dst, const InputViewType& src) {
366  static_assert (std::is_same<typename OutputViewType::non_const_value_type,
367  typename InputViewType::non_const_value_type>::value,
368  "CopyOffsetsImpl (implementation of copyOffsets): In order"
369  " to call this specialization, the input and output must "
370  "use the same offset type.");
371  static_assert (static_cast<int> (OutputViewType::rank) ==
372  static_cast<int> (InputViewType::rank),
373  "CopyOffsetsImpl (implementation of copyOffsets): In order"
374  " to call this specialization, src and dst must have the "
375  "same rank.");
376  static_assert (std::is_same<typename OutputViewType::array_layout,
377  typename InputViewType::array_layout>::value,
378  "CopyOffsetsImpl (implementation of copyOffsets): In order"
379  " to call this specialization, src and dst must have the "
380  "the same array_layout.");
381  Kokkos::deep_copy (dst, src);
382  }
383  };
384 
385  // Specializations for sameLayoutsSameOffsetTypes = false:
386  //
387  // If input and output don't have the same layout, or use different
388  // types for offsets, then we can't use Kokkos::deep_copy directly,
389  // and we may have to check for overflow.
390 
391  // Specialization for sameLayoutsSameOffsetTypes = false and
392  // outputExecSpaceCanAccessInputMemSpace = true:
393  //
394  // If the output execution space can access the input memory space,
395  // then we can use CopyOffsetsFunctor directly.
396  template<class OutputViewType,
397  class InputViewType>
398  struct CopyOffsetsImpl<OutputViewType, InputViewType,
399  false, true> {
400  static void run (const OutputViewType& dst, const InputViewType& src) {
401  static_assert (static_cast<int> (OutputViewType::rank) ==
402  static_cast<int> (InputViewType::rank),
403  "CopyOffsetsImpl (implementation of copyOffsets): "
404  "src and dst must have the same rank.");
405  constexpr bool sameLayoutsSameOffsetTypes =
406  std::is_same<typename OutputViewType::array_layout,
407  typename InputViewType::array_layout>::value &&
408  std::is_same<typename OutputViewType::non_const_value_type,
409  typename InputViewType::non_const_value_type>::value;
410  static_assert (! sameLayoutsSameOffsetTypes,
411  "CopyOffsetsImpl (implements copyOffsets): In order to "
412  "call this specialization, sameLayoutsSameOffsetTypes "
413  "must be false. That is, either the input and output "
414  "must have different array layouts, or their value types "
415  "must differ.");
416  static_assert (Kokkos::Impl::SpaceAccessibility<
417  typename OutputViewType::memory_space,
418  typename InputViewType::memory_space>::accessible,
419  "CopyOffsetsImpl (implements copyOffsets): In order to "
420  "call this specialization, the output View's space must "
421  "be able to access the input View's memory space.");
422  using functor_type = CopyOffsetsFunctor<OutputViewType, InputViewType>;
423  using execution_space = typename OutputViewType::execution_space;
424  using size_type = typename OutputViewType::size_type;
425  using range_type = Kokkos::RangePolicy<execution_space, size_type>;
426 
427  const bool debug = Details::Behavior::debug ();
428  if (debug) {
429  size_t overflowCount = 0; // output argument of the reduction
430  Kokkos::parallel_reduce ("Tpetra::Details::copyOffsets",
431  range_type (0, dst.extent (0)),
432  functor_type (dst, src),
433  overflowCount);
434  errorIfOverflow (dst, src, overflowCount);
435  }
436  else {
437  Kokkos::parallel_for ("Tpetra::Details::copyOffsets",
438  range_type (0, dst.extent (0)),
439  functor_type (dst, src));
440  }
441  }
442  };
443 
444  // Specialization for sameLayoutsSameOffsetTypes = false and
445  // outputExecSpaceCanAccessInputMemSpace = false.
446  //
447  // If the output execution space canNOT access the input memory
448  // space, then we can't use CopyOffsetsFunctor directly. Instead,
449  // tell Kokkos to copy the input View's data into the output View's
450  // memory space _first_. Since the offset types are different for
451  // this specialization, we can't just call Kokkos::deep_copy
452  // directly between the input and output Views of offsets; that
453  // wouldn't compile.
454  //
455  // This case can and does come up in practice: If the output View's
456  // execution space is Cuda, it cannot currently access host memory
457  // (that's the opposite direction from what UVM allows).
458  // Furthermore, that case specifically requires overflow checking,
459  // since (as of 28 Jan 2016 at least) Kokkos::Cuda uses a smaller
460  // offset type than Kokkos' host spaces.
461  template<class OutputViewType, class InputViewType>
462  struct CopyOffsetsImpl<OutputViewType, InputViewType,
463  false, false> {
464  static void run (const OutputViewType& dst, const InputViewType& src) {
465  static_assert (static_cast<int> (OutputViewType::rank) ==
466  static_cast<int> (InputViewType::rank),
467  "CopyOffsetsImpl (implementation of copyOffsets): In order"
468  " to call this specialization, src and dst must have the "
469  "same rank.");
470  constexpr bool sameLayoutsSameOffsetTypes =
471  std::is_same<typename OutputViewType::array_layout,
472  typename InputViewType::array_layout>::value &&
473  std::is_same<typename OutputViewType::non_const_value_type,
474  typename InputViewType::non_const_value_type>::value;
475  static_assert (! sameLayoutsSameOffsetTypes,
476  "CopyOffsetsImpl (implements copyOffsets): In order to "
477  "call this specialization, sameLayoutsSameOffsetTypes "
478  "must be false. That is, either the input and output "
479  "must have different array layouts, or their value types "
480  "must differ.");
481  using output_space_copy_type =
482  Kokkos::View<typename InputViewType::non_const_value_type*,
483  Kokkos::LayoutLeft, typename OutputViewType::device_type>;
484  using Kokkos::view_alloc;
485  using Kokkos::WithoutInitializing;
486  output_space_copy_type
487  outputSpaceCopy (view_alloc ("outputSpace", WithoutInitializing),
488  src.extent (0));
489  Kokkos::deep_copy (outputSpaceCopy, src);
490 
491  // The output View's execution space can access
492  // outputSpaceCopy's data, so we can run the functor now.
493  using functor_type =
494  CopyOffsetsFunctor<OutputViewType, output_space_copy_type>;
495  using execution_space = typename OutputViewType::execution_space;
496  using size_type = typename OutputViewType::size_type;
497  using range_type = Kokkos::RangePolicy<execution_space, size_type>;
498 
499  const bool debug = Details::Behavior::debug ();
500  if (debug) {
501  size_t overflowCount = 0;
502  Kokkos::parallel_reduce ("Tpetra::Details::copyOffsets",
503  range_type (0, dst.extent (0)),
504  functor_type (dst, outputSpaceCopy),
505  overflowCount);
506  errorIfOverflow (dst, src, overflowCount);
507  }
508  else {
509  Kokkos::parallel_for ("Tpetra::Details::copyOffsets",
510  range_type (0, dst.extent (0)),
511  functor_type (dst, outputSpaceCopy));
512  }
513  }
514  };
515 } // namespace (anonymous)
516 
528 template<class OutputViewType, class InputViewType>
529 void
530 copyOffsets (const OutputViewType& dst, const InputViewType& src)
531 {
532  static_assert (Kokkos::Impl::is_view<OutputViewType>::value,
533  "OutputViewType (the type of dst) must be a Kokkos::View.");
534  static_assert (Kokkos::Impl::is_view<InputViewType>::value,
535  "InputViewType (the type of src) must be a Kokkos::View.");
536  static_assert (std::is_same<typename OutputViewType::value_type,
537  typename OutputViewType::non_const_value_type>::value,
538  "OutputViewType (the type of dst) must be a nonconst Kokkos::View.");
539  static_assert (static_cast<int> (OutputViewType::rank) == 1,
540  "OutputViewType (the type of dst) must be a rank-1 Kokkos::View.");
541  static_assert (static_cast<int> (InputViewType::rank) == 1,
542  "InputViewType (the type of src) must be a rank-1 Kokkos::View.");
543  static_assert (std::is_integral<typename std::decay<decltype (dst(0)) >::type>::value,
544  "The entries of dst must be built-in integers.");
545  static_assert (std::is_integral<typename std::decay<decltype (src(0)) >::type>::value,
546  "The entries of src must be built-in integers.");
547 
548  TEUCHOS_TEST_FOR_EXCEPTION
549  (dst.extent (0) != src.extent (0), std::invalid_argument,
550  "copyOffsets: dst.extent(0) = " << dst.extent (0)
551  << " != src.extent(0) = " << src.extent (0) << ".");
552 
553  CopyOffsetsImpl<OutputViewType, InputViewType>::run (dst, src);
554 }
555 
556 } // namespace Details
557 } // namespace Tpetra
558 
559 #endif // TPETRA_DETAILS_COPYOFFSETS_HPP
Declaration of Tpetra::Details::Behavior, a class that describes Tpetra's behavior.
static bool debug()
Whether Tpetra is in debug mode.
static bool verbose()
Whether Tpetra is in verbose mode.
static size_t verbosePrintCountThreshold()
Number of entries below which arrays, lists, etc. will be printed in debug mode.
Implementation details of Tpetra.
void copyOffsets(const OutputViewType &dst, const InputViewType &src)
Copy row offsets (in a sparse graph or matrix) from src to dst. The offsets may have different types.
Namespace Tpetra contains the class and methods constituting the Tpetra library.
void deep_copy(MultiVector< DS, DL, DG, DN > &dst, const MultiVector< SS, SL, SG, SN > &src)
Copy the contents of the MultiVector src into dst.