Zoltan2
Zoltan2_ColoringProblem.hpp
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45 
50 #ifndef _ZOLTAN2_COLORINGPROBLEM_HPP_
51 #define _ZOLTAN2_COLORINGPROBLEM_HPP_
52 
53 #include <Zoltan2_Standards.hpp>
54 
55 #include <Zoltan2_Problem.hpp>
58 
59 #include <Zoltan2_GraphModel.hpp>
60 #include <string>
61 
62 #include <bitset>
63 
64 namespace Zoltan2{
65 
67 
87 template<typename Adapter>
88 class ColoringProblem : public Problem<Adapter>
89 {
90 public:
91 
92  typedef typename Adapter::scalar_t scalar_t;
93  typedef typename Adapter::gno_t gno_t;
94  typedef typename Adapter::lno_t lno_t;
95  typedef typename Adapter::user_t user_t;
97 
98 #ifdef HAVE_ZOLTAN2_MPI
99  typedef Teuchos::OpaqueWrapper<MPI_Comm> mpiWrapper_t;
100 #endif
101 
104  virtual ~ColoringProblem() {};
105 
108  ColoringProblem(Adapter *A, ParameterList *p,
109  const Teuchos::RCP<const Teuchos::Comm<int> > &comm) :
110  Problem<Adapter>(A, p, comm)
111  {
112  HELLO;
113  createColoringProblem();
114  };
115 
116 #ifdef HAVE_ZOLTAN2_MPI
119  ColoringProblem(Adapter *A, ParameterList *p, MPI_Comm mpicomm) :
120  ColoringProblem(A, p,
121  rcp<const Comm<int> >(new Teuchos::MpiComm<int>(
122  Teuchos::opaqueWrapper(mpicomm))))
123  {}
124 #endif
125 
128  ColoringProblem(Adapter *A, ParameterList *p) :
129  ColoringProblem(A, p, Tpetra::getDefaultComm())
130  {}
131 
134  static void getValidParameters(ParameterList & pl)
135  {
136  RCP<Teuchos::StringValidator> color_method_Validator = Teuchos::rcp(
137  new Teuchos::StringValidator(
138  Teuchos::tuple<std::string>( "SerialGreedy","D1","D1-2GL","D2","PD2" )));
139  pl.set("color_method", "SerialGreedy", "coloring algorithm",
140  color_method_Validator);
141  pl.set("verbose", false, "print all output", Environment::getBoolValidator());
142  pl.set("timing", false, "print timing data", Environment::getBoolValidator());
143  pl.set("serial_threshold",0,"vertices to recolor in serial",Environment::getAnyIntValidator());
144  pl.set("recolor_degrees",true,"recolor based on vertex degrees",Environment::getBoolValidator());
145  }
146 
148  //
149  // \param updateInputData If true this indicates that either
150  // this is the first attempt at solution, or that we
151  // are computing a new solution and the input data has
152  // changed since the previous solution was computed.
153  // If false, this indicates that we are computing a
154  // new solution using the same input data was used for
155  // the previous solution, even though the parameters
156  // may have been changed.
157  //
158  // For the sake of performance, we ask the caller to set \c updateInputData
159  // to false if he/she is computing a new solution using the same input data,
160  // but different problem parameters, than that which was used to compute
161  // the most recent solution.
162 
163  void solve(bool updateInputData=true);
164 
166  //
167  // \return a reference to the solution to the most recent solve().
168 
170  // Get the raw ptr from the rcp
171  return solution_.getRawPtr();
172  };
173 
174 private:
175  void createColoringProblem();
176 
177  RCP<ColoringSolution<Adapter> > solution_;
178 };
179 
180 
182 template <typename Adapter>
184 {
185  HELLO;
186 
187  size_t nVtx = this->baseModel_->getLocalNumObjects();
188 
189  try
190  {
191  this->solution_ = rcp(new ColoringSolution<Adapter>(nVtx));
192  }
194 
195  // Determine which algorithm to use based on defaults and parameters.
196  // Need some exception handling here, too.
197 
198  std::string method = this->params_->template get<std::string>("color_method", "SerialGreedy");
199 
200  try
201  {
202  // TODO: Ignore case
203  if (method.compare("SerialGreedy") == 0)
204  {
205  AlgSerialGreedy<Adapter> alg(this->graphModel_, this->params_,
206  this->env_, this->comm_);
207  alg.color(this->solution_);
208  }
209  else if (method.compare("D1") == 0)
210  {
211  AlgDistance1<Adapter> alg(this->inputAdapter_, this->params_,
212  this->env_, this->comm_);
213  alg.color(this->solution_);
214  }
215  else if (method.compare("D1-2GL") == 0)
216  {
217  AlgDistance1TwoGhostLayer<Adapter> alg(this->inputAdapter_,this->params_,
218  this->env_, this->comm_);
219  alg.color(this->solution_);
220  } else if(method.compare("D2") == 0)
221  {
222  AlgDistance2<Adapter> alg(this->inputAdapter_, this->params_,
223  this->env_, this->comm_);
224  alg.color(this->solution_);
225  } else if (method.compare("PD2") == 0)
226  {
227  AlgPartialDistance2<Adapter> alg(this->inputAdapter_, this->params_,
228  this->env_, this->comm_);
229  alg.color(this->solution_);
230  }
231  }
233 }
234 
236 //template <typename Adapter>
237 //void ColoringProblem<Adapter>::redistribute()
238 //{
239 // HELLO;
240 //}
241 
244 // Method with common functionality for creating a ColoringProblem.
245 // Individual constructors do appropriate conversions of input, etc.
246 // This method does everything that all constructors must do.
247 
248 template <typename Adapter>
250 {
251  HELLO;
252  using Teuchos::ParameterList;
253 
254 // std::cout << __func__zoltan2__ << " input adapter type "
255 // << this->inputAdapter_->inputAdapterType() << " "
256 // << this->inputAdapter_->inputAdapterName() << std::endl;
257 
258  // Create a copy of the user's communicator.
259 
260  // Only graph model supported.
261  // TODO: Allow hypergraph later?
262 
263  ModelType modelType = GraphModelType;
264 
265  // Select Model based on parameters and InputAdapter type
266 
267  std::bitset<NUM_MODEL_FLAGS> graphFlags;
268  //std::bitset<NUM_MODEL_FLAGS> idFlags;
269 
270  switch (modelType) {
271 
272  case GraphModelType:
273  graphFlags.set(REMOVE_SELF_EDGES);
274  graphFlags.set(BUILD_LOCAL_GRAPH);
275  this->graphModel_ = rcp(new GraphModel<base_adapter_t>(
276  this->baseInputAdapter_, this->envConst_, this->comm_, graphFlags));
277 
278  this->baseModel_ = rcp_implicit_cast<const Model<base_adapter_t> >(
279  this->graphModel_);
280 
281  break;
282 
283 
284  case IdentifierModelType:
285  case HypergraphModelType:
286  case CoordinateModelType:
287  std::cout << __func__zoltan2__ << " Model type " << modelType
288  << " not yet supported." << std::endl;
289  break;
290 
291  default:
292  std::cout << __func__zoltan2__ << " Invalid model" << modelType
293  << std::endl;
294  break;
295  }
296 }
297 } //namespace Zoltan2
298 
299 #endif
Zoltan2::BasicUserTypes< zscalar_t, zlno_t, zgno_t > user_t
Definition: Metric.cpp:74
Defines the ColoringSolution class.
#define Z2_FORWARD_EXCEPTIONS
Forward an exception back through call stack.
#define __func__zoltan2__
Defines the GraphModel interface.
Defines the Problem base class.
Gathering definitions used in software development.
#define HELLO
void color(const RCP< ColoringSolution< Adapter > > &solution)
Coloring method.
void color(const RCP< ColoringSolution< Adapter > > &solution)
Coloring method.
void color(const RCP< ColoringSolution< Adapter > > &solution)
Coloring method.
ColoringProblem sets up coloring problems for the user.
Adapter::base_adapter_t base_adapter_t
void solve(bool updateInputData=true)
Direct the problem to create a solution.
ColoringSolution< Adapter > * getSolution()
Get the solution to the problem.
ColoringProblem(Adapter *A, ParameterList *p, const Teuchos::RCP< const Teuchos::Comm< int > > &comm)
Constructor that uses a Teuchos::Comm.
virtual ~ColoringProblem()
Destructor.
static void getValidParameters(ParameterList &pl)
Set up validators specific to this Problem.
ColoringProblem(Adapter *A, ParameterList *p)
Constructor that uses a default communicator.
The class containing coloring solution.
static RCP< Teuchos::BoolParameterEntryValidator > getBoolValidator()
Exists to make setting up validators less cluttered.
static RCP< Teuchos::AnyNumberParameterEntryValidator > getAnyIntValidator()
Exists to make setting up validators less cluttered.
GraphModel defines the interface required for graph models.
Problem base class from which other classes (PartitioningProblem, ColoringProblem,...
map_t::local_ordinal_type lno_t
Definition: mapRemotes.cpp:17
map_t::global_ordinal_type gno_t
Definition: mapRemotes.cpp:18
Zoltan2::BaseAdapter< userTypes_t > base_adapter_t
Created by mbenlioglu on Aug 31, 2020.
ModelType
An identifier for the general type of model.
@ IdentifierModelType
@ HypergraphModelType
@ CoordinateModelType
@ REMOVE_SELF_EDGES
algorithm requires no self edges
@ BUILD_LOCAL_GRAPH
model represents graph within only one rank