Zoltan2_CoordinateModel.hpp

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//   Zoltan2: A package of combinatorial algorithms for scientific computing
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#ifndef _ZOLTAN2_COORDINATEMODEL_HPP_
#define _ZOLTAN2_COORDINATEMODEL_HPP_
 
#include <Zoltan2_Model.hpp>
#include <Zoltan2_MeshAdapter.hpp>
#include <Zoltan2_MatrixAdapter.hpp>
#include <Zoltan2_GraphAdapter.hpp>
#include <Zoltan2_IdentifierAdapter.hpp>
#include <Zoltan2_VectorAdapter.hpp>
#include <Zoltan2_StridedData.hpp>
 
namespace Zoltan2 {
 
template <typename Adapter>
class CoordinateModel : public Model<Adapter>
{
public:
 
#ifndef DOXYGEN_SHOULD_SKIP_THIS
  typedef typename Adapter::scalar_t    scalar_t;
  typedef typename Adapter::gno_t       gno_t;
  typedef typename Adapter::lno_t       lno_t;
  typedef typename Adapter::node_t      node_t;
  typedef typename Adapter::user_t      user_t;
  typedef typename Adapter::userCoord_t userCoord_t;
  typedef StridedData<lno_t, scalar_t>  input_t;
#endif
 
  // Constructors for each Adapter type
 
  // VectorAdapter
  CoordinateModel(const RCP<const VectorAdapter<user_t> > &ia,
                  const RCP<const Environment> &env,
                  const RCP<const Comm<int> > &comm,
                  modelFlag_t &flags):
                  numGlobalCoordinates_(), env_(env), comm_(comm),
                  coordinateDim_(), gids_(), 
                  xyz_(), userNumWeights_(0), weights_()
  {
    typedef VectorAdapter<user_t> adapterWithCoords_t;
    sharedConstructor<adapterWithCoords_t>(&(*ia), env, comm, flags);
  }
 
  // MatrixAdapter
  CoordinateModel(const RCP<const MatrixAdapter<user_t,userCoord_t> > &ia,
                  const RCP<const Environment> &env,
                  const RCP<const Comm<int> > &comm,
                  modelFlag_t &flags) :
                  numGlobalCoordinates_(), env_(env), comm_(comm),
                  coordinateDim_(), gids_(), 
                  xyz_(), userNumWeights_(0), weights_()
  {
    if (!(ia->coordinatesAvailable()))
      throw std::logic_error("No coordinate info provided to MatrixAdapter.");
    else {
      typedef VectorAdapter<userCoord_t> adapterWithCoords_t;
      adapterWithCoords_t *va = ia->getCoordinateInput();
      sharedConstructor<adapterWithCoords_t>(va, env, comm, flags);
    }
  }
 
  // GraphAdapter
  CoordinateModel(const RCP<const GraphAdapter<user_t,userCoord_t> > &ia,
                  const RCP<const Environment> &env,
                  const RCP<const Comm<int> > &comm,
                  modelFlag_t &flags) :
                  numGlobalCoordinates_(), env_(env), comm_(comm),
                  coordinateDim_(), gids_(), 
                  xyz_(), userNumWeights_(0), weights_()
  {
    if (!(ia->coordinatesAvailable()))
      throw std::logic_error("No coordinate info provided to GraphAdapter.");
    else {
      typedef VectorAdapter<userCoord_t> adapterWithCoords_t;
      adapterWithCoords_t *va = ia->getCoordinateInput();
      sharedConstructor<adapterWithCoords_t>(va, env, comm, flags);
    }
  }
 
  // MeshAdapter
  CoordinateModel(const RCP<const MeshAdapter<user_t> > &ia,
      const RCP<const Environment> &env,
      const RCP<const Comm<int> > &comm,
      modelFlag_t &flags) :
                  numGlobalCoordinates_(), env_(env), comm_(comm),
                  coordinateDim_(), gids_(), 
                  xyz_(), userNumWeights_(0), weights_()
  {
    typedef MeshAdapter<user_t> adapterWithCoords_t;
    sharedConstructor<adapterWithCoords_t>(&(*ia), env, comm, flags);
  }
 
  // IdentifierAdapter
  CoordinateModel(const RCP<const IdentifierAdapter<user_t> > &ia,
                  const RCP<const Environment> &env,
                  const RCP<const Comm<int> > &comm,
                  modelFlag_t &flags)
  {
    throw std::logic_error(
      "A coordinate model can not be build from an IdentifierAdapter");
  }
 
  // CoordinateModel interface.
 
  int getCoordinateDim() const { return coordinateDim_;}
 
  size_t getLocalNumCoordinates() const { return gids_.size();}
 
  global_size_t getGlobalNumCoordinates() const {return numGlobalCoordinates_;}
 
  int getNumWeightsPerCoordinate() const { return userNumWeights_;}
 
  size_t getCoordinates(ArrayView<const gno_t>  &Ids,
                        ArrayView<input_t> &xyz,
                        ArrayView<input_t> &wgts) const
  {
    xyz = xyz_.view(0, coordinateDim_);
    wgts = weights_.view(0, userNumWeights_);
 
    size_t nCoord = getLocalNumCoordinates();
    Ids =  ArrayView<const gno_t>();
 
    if (nCoord){
      Ids = Teuchos::arrayView<const gno_t>(
        reinterpret_cast<const gno_t *>(gids_.getRawPtr()), nCoord);
    }
 
    return nCoord;
  }
 
  size_t getCoordinatesKokkos(
    Kokkos::View<const gno_t *, typename node_t::device_type> &Ids,
    // coordinates in MJ are LayoutLeft since Tpetra Multivector gives LayoutLeft
    Kokkos::View<scalar_t **,
      Kokkos::LayoutLeft, typename node_t::device_type> &xyz,
    Kokkos::View<scalar_t **, typename node_t::device_type> &wgts) const
  {
    Ids = kokkos_gids_;
    xyz = kokkos_xyz_;
    wgts = kokkos_weights_;
    return getLocalNumCoordinates();
  }
 
  // The Model interface.
 
  size_t getLocalNumObjects() const
  {
    return getLocalNumCoordinates();
  }
 
  size_t getGlobalNumObjects() const
  {
    return getGlobalNumCoordinates();
  }
 
private:
  size_t numGlobalCoordinates_;
  const RCP<const Environment> env_;
  const RCP<const Comm<int> > comm_;
  int coordinateDim_;
 
  // TODO: We now have a Kokkos version and non kokkos version so need to clean
  // this up and perhaps eliminate the non-kokkos version completely.
  // However not all tests are converted to Kokkos so keeping both forms around
  // for now is probably necessary.
  Kokkos::View<gno_t *, typename node_t::device_type> kokkos_gids_;
  // coordinates in MJ are LayoutLeft since Tpetra Multivector gives LayoutLeft
  Kokkos::View<scalar_t **, Kokkos::LayoutLeft, typename node_t::device_type> kokkos_xyz_;
  Kokkos::View<scalar_t **, typename node_t::device_type> kokkos_weights_;
 
  ArrayRCP<const gno_t> gids_;
  ArrayRCP<input_t> xyz_;
  int userNumWeights_;
  ArrayRCP<input_t> weights_;
 
  template <typename AdapterWithCoords>
  void sharedConstructor(const AdapterWithCoords *ia,
                         const RCP<const Environment> &env,
                         const RCP<const Comm<int> > &comm,
                         modelFlag_t &flags);
 
};
 
 
 
// sharedConstructor
template <typename Adapter>
template <typename AdapterWithCoords>
void CoordinateModel<Adapter>::sharedConstructor(
    const AdapterWithCoords *ia,
    const RCP<const Environment> &/* env */,
    const RCP<const Comm<int> > &comm,
    modelFlag_t &/* flags */)
{
  size_t nLocalIds = ia->getLocalNumIDs();
 
  // Get coordinates and weights (if any)
 
  int tmp[2], gtmp[2];
  tmp[0] = ia->getDimension();
  tmp[1] = ia->getNumWeightsPerID();
  Teuchos::reduceAll<int, int>(*comm, Teuchos::REDUCE_MAX, 2, tmp, gtmp);
  coordinateDim_ = gtmp[0];
  userNumWeights_ = gtmp[1];
 
  env_->localBugAssertion(__FILE__, __LINE__, "coordinate dimension",
    coordinateDim_ > 0, COMPLEX_ASSERTION);
 
  input_t *coordArray = new input_t [coordinateDim_];
  input_t *weightArray = NULL;
  if (userNumWeights_)
    weightArray = new input_t [userNumWeights_];
 
  env_->localMemoryAssertion(__FILE__, __LINE__, userNumWeights_+coordinateDim_,
    coordArray && (!userNumWeights_|| weightArray));
 
 
  if (nLocalIds){
    const gno_t *gids=NULL;
 
    ia->getIDsView(gids);
    gids_ = arcp(gids, 0, nLocalIds, false);
 
    for (int dim=0; dim < coordinateDim_; dim++){
      int stride;
      const scalar_t *coords=NULL;
      try{
        ia->getCoordinatesView(coords, stride, dim);
      }
      Z2_FORWARD_EXCEPTIONS;
 
      ArrayRCP<const scalar_t> cArray(coords, 0, nLocalIds*stride, false);
      coordArray[dim] = input_t(cArray, stride);
    }
 
    for (int idx=0; idx < userNumWeights_; idx++){
      int stride;
      const scalar_t *weights;
      try{
        ia->getWeightsView(weights, stride, idx);
      }
      Z2_FORWARD_EXCEPTIONS;
 
      ArrayRCP<const scalar_t> wArray(weights, 0, nLocalIds*stride, false);
      weightArray[idx] = input_t(wArray, stride);
    }
  }
 
  xyz_ = arcp(coordArray, 0, coordinateDim_);
 
  if (userNumWeights_)
    weights_ = arcp(weightArray, 0, userNumWeights_);
 
  // These are deep copies so we don't hold on to refs of the device views causing problems without UVM
  Kokkos::View<const gno_t *, typename node_t::device_type> kokkos_gids;
  ia->getIDsKokkosView(kokkos_gids);
  kokkos_gids_ =   Kokkos::View<gno_t *, typename node_t::device_type>("kokkos_gids_",kokkos_gids.extent(0));
  Kokkos::deep_copy(kokkos_gids_, kokkos_gids);
 
  Kokkos::View<scalar_t **, Kokkos::LayoutLeft, typename node_t::device_type> kokkos_xyz;
  ia->getCoordinatesKokkosView(kokkos_xyz);
  kokkos_xyz_ =   Kokkos::View<scalar_t **, Kokkos::LayoutLeft, typename node_t::device_type>("kokkos_xyz", kokkos_xyz.extent(0), kokkos_xyz.extent(1));
  Kokkos::deep_copy(kokkos_xyz_, kokkos_xyz);
 
  if(userNumWeights_ > 0) {
    Kokkos::View<scalar_t **, typename node_t::device_type> kokkos_weights;
    ia->getWeightsKokkosView(kokkos_weights);
    kokkos_weights_ = Kokkos::View<scalar_t **, typename node_t::device_type>("kokkos_weights_",kokkos_weights.extent(0), kokkos_weights.extent(1));
    Kokkos::deep_copy(kokkos_weights_, kokkos_weights);
  }
 
 
  Teuchos::reduceAll<int, size_t>(*comm, Teuchos::REDUCE_SUM, 1, 
                                  &nLocalIds, &numGlobalCoordinates_);
 
  env_->memory("After construction of coordinate model");
}
 
}   // namespace Zoltan2
 
#endif